M. Bernt, D. Merkle, K. Ramsch, G. Fritzsch, M. Perseke, D. Bernhard, M. Schlegel, P. Stadler, M. Middendorf
CREx: Inferring Genomic Rearrangements Based on Common Intervals
Bioinformatics, 23(21): 2957-2958, 2007.

B. Scheuermann, S. Janson, M. Middendorf
Hardware-oriented Ant Colony Optimization
Journal of Systems Architecture, 53(7): 386-402, 2007.

M. Bernt, D. Merkle, M. Middendorf
Using Median Sets for Inferring Phylogenetic Trees
Bioinformatics, 23: e129-e135, 2007.
This paper won the 3rd prize in the Best Paper Competition of the 5th European Conference on Computational Biology (ECCB), Eilat, Israel, Jan. 21-24, 2007.

S. Janson, M. Middendorf, M. Beekman
Searching for a new home - scouting behaviour of honeybee swarms
Behavioral Ecology, 18(2): 384-392, 2007.