R. L. V. Moritz, M. Bernt, and M. Middendorf
Annotation Guided Local Similarity Search in Multiple Sequences and its Application to Mitochondrial Genomes
Proc. 12th IEEE International Conference on Bioinformatics & Bioengineering (BIBE),157-162, 2012

M. Bernt, K.-M. Chao, J.-W. Kao, M. Middendorf, E. Tannier
Preserving Inversion Phylogeny Reconstruction
Algorithms in Bioinformatics 2012, Lecture Notes in Computer Science, Vol. 7534, Springer, pp. 1-13